Janet Shaw
Professor of Biochemistry
B.A. University of California, Berkeley
Ph.D. University of California, Los Angeles
Janet Shaw's Lab Page
Janet Shaw's PubMed Literature Search
Research
Eukaryotic cells contain many membrane-bound organelles, each with a characteristic shape and distribution. Our lab is interested in how organelles establish and maintain these features. We use yeast and mammalian cells to study how mitochondrial fission, fusion and transport regulate mitochondrial function and inheritance during cell division. Our studies are directly relevant to human heath and disease. Defects in these processes cause embryonic lethality in multicellular organisms and are linked to neurological disorders in humans.
In most cells, mitochondria are organized as highly branched tubular networks. This network is dynamic, undergoing frequent fission and fusion events and moving around on cytoskeletal tracks. Fission, fusion and transport are regulated by novel GTPases that are conserved from yeast to humans.
Mitochondrial Fission: Our lab identified the first molecular mediator of mitochondrial fission, a dynamin-related GTPase called Dnm1p. Dnm1p forms spirals on the outer mitochondrial membrane that ‘clip’ mitochondrial tubules into smaller pieces. Two additional molecules, called Fis1p and Mdv1p, work together with Dnm1p during the fission reaction. We’ve used cellular, genetic and biochemical approaches to dissect sequential steps in the assembly of functional fission complexes containing all three proteins. Studies of the mammalian homolog of Dnm1p suggest that fission catalyzed by this GTPase is essential for the release of cell death factors from mitochondria during apoptosis (Frank et al., 2001). Thus, regulation of mitochondrial fission also plays an important role in controlling cell survival and programmed cell death.
Mitochondrial Fusion: The Fzo1p GTPase is embedded in the outer mitochondrial membrane and mediates mitochondrial fusion. Work from our lab and others indicates that Fzo1p forms a complex with itself and two additional proteins, Mgm1p and Ugo1p. Interest in mitochondrial fusion has been stimulated by the finding that mutations in the human homologs of Mgm1p and Fzo1p cause neurological diseases called dominant optic atrophy and Charcot-Marie-Tooth Syndrome (Alexander, C. et al., and Delettre, C. et al., 2000; Lawson, V. and Flanigan, K., 2005; Kijima, K. et al., 2005, Bradbury, J., 2004; Zuchner, S. et al., 2004). We collaborate with researchers in Human Genetics at the University of Utah to better understand why defects in mitochondrial fusion cause these disorders in humans.
Mitochondrial Transport: Yeast Gem1p is an outer mitochondrial membrane protein with two GTPase domains and two calcium-binding motifs. When Gem1p is absent or mutated, both mitochondrial morphology and mitochondrial movement from mother to daughter cell during division are disrupted. New studies reveal that mammalian (Fransson et al., 2006) and insect (Guo et al., 2005; Glater et al., 2006) homologs of Gem1p recruit molecular motors that transport mitochondria along cytoskeletal tracks. Flies lacking Gem1p die early in development because mitochondria cannot be transported down axons to the synapse. In budding yeast, mitochondrial transport may also be regulated by Gem1p, however, mitochondrial movement occurs on actin filaments rather than on microtubules. We are currently studying how Gem1p controls mitochondrial movement on different cytoskeletal elements in eukaryotes.

The Dnm1 and Fzo1 GTPases act in opposing fission and fusion pathways to maintain tubular mitochondrial networks. Yeast mitochondria labeled with the Green Fluorescent Protein (GFP) form a branched network of tubular membranes that continually divide and fuse (middle panel). Mitochondrial division/fission is regulated by the Dnm1 GTPase. Mitochondrial fusion is regulated by the Fzo1 GTPase. Mutations in the Dnm1 GTPase (dnm1D) block fission and lead to the fusion of mitochondrial tips with each other and the sides of other tubules, forming elaborate "net" structures (left panel); Mutations in the Fzo1 GTPase (fzo1D) block fusion and lead to fragmentation of the mitochondrial network due to ongoing fission (right panel). The mother cell is in the bottom of each panel and the yeast daughter cell or 'bud' is in the top of each panel.
References
1. Amiott EA, Lott P, Soto J, Kang PB, McCaffery JM, DiMauro S, Abel ED, Flanigan KM, Lawson V,* Shaw JM* (2008) Mitochondrial fusion and function in Charcot-Marie Tooth Type 2A fibroblasts with mitofusin 2 mutations. *co-communicating authors. Experimental Neurology, Epub 2008 Jan 26
2. Kondo-Okamoto N, Shaw JM, Okamoto K (2008) Tetratricopeptide repeat proteins Tom70 and Tom71 mediate yeast mitochondrial morphogenesis. EMBO Reports 1:63-69
3. Frederick RL, Okamoto K, Shaw JM (2007) Multiple pathways influence mitochondrial inheritance in yeast. Genetics 178:825-837
4. Frederick RL, Shaw JM (2007) Moving mitochondria: establishing distribution of an essential organelle. Traffic 8:1668–1675
5. Coonrod EM, Karren MA, Shaw JM (2007) Ugo1p is a multipass transmembrane protein with a single carrier domain required for mitochondrial fusion. Traffic 8:500-511
6. Kondo-Okamoto N, Ohkuni K, Kitagawa K, Shaw JM, Okamoto K (2006) The novel F-box protein Mfb1p regulates mitochondrial tubular connectivity in yeast. Mol Biol Cell 17:3756-3767
7. Bhar D, Karren MA, Babst M, Shaw JM (2006) Dimeric Dnm1G385Dp interacts with Mdv1p on mitochondria and can be stimulated to assemble into fission complexes containing Mdv1p and Fis1p. J Biol Chem. 281:17312-20
8. Karren MA, Coonrod EM, Anderson TK, Shaw JM (2005) The role of Fis1p-Mdv1p interactions in mitochondrial fission complex assembly. J. Cell Biol. 171:291-301
9. Okamoto K, Shaw JM (2005) Mitochondrial dynamics in yeast and multicellular eukaryotes, Ann. Rev. Genetics 39:503-536
10. Frederick RL, McCaffery JM, Cunningham KW, Okamoto K, Shaw JM (2004) Yeast Miro GTPase, Gem1p, regulates mitochondrial morphology via a novel pathway. J. Cell Biology 167:87-98


